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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LGG rs2279185 chr4:875994 C/G 0 407 0.23 11.92 15.6 KM Plot
LGG rs2280270 chr17:75205562 C/T 0.000181 407 15.17 17.62 15.53 KM Plot
LGG rs2285298 chr8:17509582 C/T 0 403 15.13 20.37 3.77 KM Plot
LGG rs2285299 chr8:17509634 C/G 0 401 15.03 18.43 3.77 KM Plot
LGG rs2288379 chr12:102123919 G/T 2.24E-5 401 13.87 19.33 21.25 KM Plot
LGG rs2295905 chr14:23348952 A/G 0.000226 407 2.63 12.9 15.95 KM Plot
LGG rs2302138 chr14:74363305 C/A 1.63E-7 406 14.67 17.43 3.93 KM Plot
LGG rs2302139 chr14:74362935 A/C 3.09E-7 407 14.47 18.13 3.93 KM Plot
LGG rs2302969 chr19:33113295 A/G 4.41E-6 407 6.1 13.02 15.57 KM Plot
LGG rs2303340 chr2:86333193 A/G 1.49E-5 407 15.18 15.83 13.62 KM Plot
LGG rs2303568 chr10:123323962 A/G 2.94E-7 407 15.17 16.57 5.45 KM Plot
LGG rs2304375 chr7:56049117 T/C 1.58E-10 406 15.32 15.93 7.8 KM Plot
LGG rs2307362 chr2:201785837 A/G 7.52E-6 407 13.2 15.18 15.47 KM Plot
LGG rs2317581 chr3:100914116 C/G 2.3E-7 407 15.67 14.8 10.07 KM Plot
LGG rs2317582 chr3:100914154 C/G 4.78E-7 407 8.43 14.98 15.67 KM Plot